When Secret Wars hit, the 616 universe was destroyed, while that event took sometime to resolve, a All-New, All-Different universe was launched.
(Which may or may not still be reffered to as 616)
Some relatively new books such as All-New Hawkeye, and Uncanny Avengers v2 only made it to #5, before being relaunched post-Secret Wars into the All-New, All-Different universe with a new #1.
Did any Marvel Universe title retain numbering after entering the post-Secret Wars continuity?
So, excluding things like Miracleman, Star Wars, The Dark Tower etc...