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Sci-fi story from late 90's or early 2000's collection book that was about a starship survivor who is ejected in a lifepod only big enough for himself that has an AI that keeps him in a matrix-like reality as it drifts eons through space.

The story ends with the machine AI landing on a planet with the bio-remains of the survivor, long dead, which the machine has altered through accelerated evolution to create beings that somewhat resemble the long gone spaceship survivor.

This was part of a collection of stories.

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