In the season 4 finale, we find out that
William Bell is planning to let both universes collapse to create a new one of his design.
Since the Bridge has been deactivated, he has been using Olivia as a power source.
OLIVIA: The new energy source? It's me. Bell's going to try and use me to collapse the two universes. That's why he's been activating me.
Fringe, S4E22, "Brave New World, Part 2"
Or perhaps that was his plan all along.
WILLIAM BELL: (...) Olivia is a living uncertainty engine. Every breath she takes brings us closer to Nirvana. Every beat of her heart tears the world from its hinges. She is The Redeemer. (...)
Fringe, S4E22, "Brave New World, Part 2"
But how does this work? Is it merely Olivia's existence that does this? If the process somehow feeds of her energy, how?